CDS

Accession Number TCMCG017C02486
gbkey CDS
Protein Id OMP11372.1
Location join(21548..21765,21858..21976,22099..22220,22447..22629,22800..22918,23023..23071,23182..23283,23429..23504,23687..23750,24133..24247,24337..24437,24779..24935,25066..25296)
GeneID InterPro:IPR000924
Organism Corchorus olitorius
locus_tag COLO4_03850

Protein

Length 551aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01010741.1
Definition Glutamyl/glutaminyl-tRNA synthetase, class Ib [Corchorus olitorius]
Locus_tag COLO4_03850

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class-I aminoacyl-tRNA synthetase family
KEGG_TC -
KEGG_Module M00121        [VIEW IN KEGG]
M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R05578        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko02048        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01885        [VIEW IN KEGG]
EC 6.1.1.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00860        [VIEW IN KEGG]
ko00970        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
map00860        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006424        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009658        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0035670        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048440        [VIEW IN EMBL-EBI]
GO:0048467        [VIEW IN EMBL-EBI]
GO:0048481        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACTCTCGTTGCAGGGACGCCGTGGATGAGAATCAGAGTGTTTCCTGAACTTGCTCCTCCGTTTCTTTTTCGCCGCCATTTCCGTAGGAACTTCTCTGTGCGTGCGTCAATTGACAGTGATGCACCAGTCAGAGTGCGTTTCGCTCCTTCGCCAACCGGCAATCTCCACGTCGGCGGTGCCCGAACTGCTCTATTCAATTACTTGTTCGCTAGATCGAAAGGAGGAAAATTTGTGCTGAGAATTGAGGATACTGACTTGGAGAGGTCGACGCGGGAATCAGAGGAGGCTTTGCTCCGTGATTTAACTTGGCTGGGTCTTGACTGGGATGAAGGTCCTGGTGTGGGTGGGGACTATGGTCCTTACCGTCAATCCGAGAGAAATTCTATGTACAAACAATATGCTGAGACGCTCTTAGATTCTGGTCATGTTTATCGTTGTTTTTGTTCCAATGAGGAACTTGAAAAAATGAAGGAAATTGCAGAGCTAAAGAAGCTTCCTCCAGTATACAGTGGAAAATGGGCCACTGCAACAGATGAAGAGGTACAAGAAGAGCTAGCAAAGGGAACCCCGTATACATATCGATTTCGTGTTCCAAAGGAAGGGAGCTTGAAAATTAATGACCTTATTCGAGGCGAAGTTAGCTGGAAATTGGACACTCTTGGAGATTTTGTTGTAATGAGGAGCAATGGACAACCAGTTTACAACTTTTGTGTTACTGTTGATGATGCTACCATGGCTATTTCACATGTGATAAGAGCGGAAGAGCACTTACCTAATACTCTAAGGCAAGCCTTAATATACAAGGCCCTTGGGTTCCCAATGCCTCTCTTTGCCCATGTTTCTTTGATTCTTGCACCTGATAGGAGTAAACTGTCAAAACGTCATGGTGCAACTTCAGTTGGTCAGGCAATGGTGAATTACTTGGCACTTTTAGGTTGGGGTGATGGAACTGAAAATGAATTTTTCACAATTGAGCAACTCGTTGAAAAATTCACAATTGATCGTGTTAACAAAAGTGGTGCTGTTTTTGACTCCACCAAGTTAAGGTGGATGAATGGTCAGCACTTAAGAGCACTTCCCATTGAGGAGTTGACCAAGCTTATTGGTGAGCGCTGGAAGAGTGCTGGTCTTCTCATAGAGTCAGCAGGGCCATTTATAGATGAGGCAGTTCAGCTTCTTAAGGATGGGATTGACTTGGTAACAGATTCGGATACAGCACTCTCGAACTTGCTTTCTTATCCTCTGCATGCGACCTTGACAAGCCCTGAAGCTAAATCTGTTGTGGAAGATAAGCTCTCTGAGTTCTCTGCCAGCCTCATAGCTGCCTATGATAGTGGTGAACTCCTCAGTGCATTGGAAGAAGGTCATGCTGGCTGGCAGAAGTGGGTGAAGGGCTTTGGCAAAGCTCAAAAGCGCAAGGGGAAATCACTCTTCATGCCATTGAGAGTGTTACTGACAGGAAAACTCCACGGCCCTGATATGGGTTCCAGTGTAGTCCTAATCTATAAAGCTGGAAACAACGATGTTGTTGCTCCCCAAGCGGGATTTATGCCATTGAGAGAAAGGTTCGAGATTTTGAGACAACTTGACTGGGAAGCTCTCACCCAGGACCAGCCTGCTTTGGAGTCTGCGGCTACTGTATCAAATTAA
Protein:  
MATLVAGTPWMRIRVFPELAPPFLFRRHFRRNFSVRASIDSDAPVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTRESEEALLRDLTWLGLDWDEGPGVGGDYGPYRQSERNSMYKQYAETLLDSGHVYRCFCSNEELEKMKEIAELKKLPPVYSGKWATATDEEVQEELAKGTPYTYRFRVPKEGSLKINDLIRGEVSWKLDTLGDFVVMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPLFAHVSLILAPDRSKLSKRHGATSVGQAMVNYLALLGWGDGTENEFFTIEQLVEKFTIDRVNKSGAVFDSTKLRWMNGQHLRALPIEELTKLIGERWKSAGLLIESAGPFIDEAVQLLKDGIDLVTDSDTALSNLLSYPLHATLTSPEAKSVVEDKLSEFSASLIAAYDSGELLSALEEGHAGWQKWVKGFGKAQKRKGKSLFMPLRVLLTGKLHGPDMGSSVVLIYKAGNNDVVAPQAGFMPLRERFEILRQLDWEALTQDQPALESAATVSN